Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | E0E99_14430 | Not Available | Negative | 2970334 - 2971182 | 32049.3 |
| carbon-phosphorus lyase complex subunit phni | E0E99_14435 | Not Available | Negative | 2971172 - 2972239 | 38887.0 |
| phosphonate c-p lyase system protein phnh | E0E99_14440 | Not Available | Negative | 2972239 - 2972823 | 20937.4 |
| phosphonate c-p lyase system protein phng | E0E99_14445 | Not Available | Negative | 2972820 - 2973272 | 16777.1 |
| phosphonate metabolism transcriptional regulator phnf | E0E99_14450 | Not Available | Negative | 2973273 - 2973998 | 27753.2 |
| phosphonate abc transporter, permease protein phne | E0E99_14455 | Not Available | Negative | 2974019 - 2974798 | 28452.4 |
| phosphonate abc transporter substrate-binding protein | E0E99_14460 | Not Available | Negative | 2974903 - 2975919 | 37300.4 |
| phosphonate abc transporter atp-binding protein | E0E99_14465 | Not Available | Negative | 2976075 - 2976863 | 29295.2 |
| voc family metalloprotein yjdn | E0E99_14470 | Not Available | Negative | 2976996 - 2977445 | 16420.2 |
| phna family protein | E0E99_14475 | Not Available | Negative | 2977585 - 2977920 | 12291.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

