Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | E0E99_14380 | Not Available | Negative | 2961428 - 2962951 | 55653.0 |
| histidine kinase | E0E99_14385 | Not Available | Positive | 2962957 - 2963064 | 3704.54 |
| hybrid sensor histidine kinase/response regulator | E0E99_14390 | Not Available | Positive | 2963066 - 2965330 | 82891.9 |
| hypothetical protein | E0E99_14395 | Not Available | Positive | 2965400 - 2965729 | 13451.3 |
| phosphonate metabolism protein phnp | E0E99_14400 | Not Available | Negative | 2965931 - 2966689 | 28020.8 |
| aminoalkylphosphonate n-acetyltransferase | E0E99_14405 | Not Available | Negative | 2966698 - 2967132 | 16223.4 |
| ribose 1,5-bisphosphokinase | E0E99_14410 | Not Available | Negative | 2967119 - 2967673 | 20298.4 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | E0E99_14415 | Not Available | Negative | 2967676 - 2968812 | 41921.7 |
| phosphonate c-p lyase system protein phnl | E0E99_14420 | Not Available | Negative | 2968809 - 2969489 | 24956.2 |
| phosphonate c-p lyase system protein phnk | E0E99_14425 | Not Available | Negative | 2969579 - 2970337 | 27756.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

