Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate/aspartate:proton symporter gltp | E0E99_14330 | Not Available | Positive | 2951303 - 2952616 | 47153.2 |
| sel1 repeat family protein | E0E99_14335 | Not Available | Negative | 2952721 - 2953410 | 25115.5 |
| formate dehydrogenase subunit alpha | E0E99_14340 | Not Available | Negative | 2953514 - 2955661 | 78999.8 |
| hypothetical protein | E0E99_14345 | Not Available | Positive | 2955724 - 2955978 | 9319.06 |
| response regulator transcription factor | E0E99_14350 | Not Available | Positive | 2955950 - 2956681 | 26797.0 |
| carbohydrate kinase family protein | E0E99_14355 | Not Available | Negative | 2956730 - 2957734 | 36824.2 |
| ketose 1,6-bisphosphate aldolase | E0E99_14360 | Not Available | Negative | 2957731 - 2958591 | 31293.4 |
| d-lyxose/d-mannose family sugar isomerase | E0E99_14365 | Not Available | Negative | 2958606 - 2959289 | 25770.3 |
| transcriptional regulator | E0E99_14370 | Not Available | Negative | 2959410 - 2960351 | 32787.6 |
| ribose abc transporter permease | E0E99_14375 | Not Available | Negative | 2960440 - 2961435 | 34654.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

