Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response translation initiation inhibitor ycih | E0E99_14275 | Not Available | Negative | 2941387 - 2941713 | 11438.9 |
| orotidine-5'-phosphate decarboxylase | E0E99_14280 | Not Available | Negative | 2941714 - 2942451 | 26355.8 |
| lipopolysaccharide assembly protein lapb | E0E99_14285 | Not Available | Negative | 2942642 - 2943811 | 44556.6 |
| lapa family protein | E0E99_14290 | Not Available | Negative | 2943818 - 2944126 | 11334.1 |
| phosphatidylglycerophosphatase b | E0E99_14295 | Not Available | Negative | 2944276 - 2945040 | 29137.1 |
| gtp cyclohydrolase ii | E0E99_14300 | Not Available | Positive | 2945243 - 2945833 | 21721.2 |
| aconitate hydratase acna | E0E99_14305 | Not Available | Negative | 2945883 - 2948558 | 97476.7 |
| ymia family putative membrane protein | E0E99_14310 | Not Available | Negative | 2949037 - 2949165 | 4787.95 |
| heme lyase nrfefg subunit nrff | E0E99_14320 | Not Available | Positive | 2949970 - 2950347 | 14395.3 |
| heme lyase nrfefg subunit nrfg | E0E99_14325 | Not Available | Positive | 2950347 - 2950958 | 22863.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

