Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspe | E0E99_14025 | Not Available | Positive | 2893295 - 2894245 | 35829.2 |
| duf2534 family protein | E0E99_14030 | Not Available | Negative | 2894294 - 2894554 | 9417.96 |
| mechanosensitive ion channel family protein | E0E99_14035 | Not Available | Positive | 2894799 - 2895830 | 38527.2 |
| nad(p)-dependent alcohol dehydrogenase | E0E99_14040 | Not Available | Negative | 2895868 - 2896920 | 37810.6 |
| cupin domain-containing protein | E0E99_14045 | Not Available | Negative | 2896964 - 2897416 | 16698.4 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | E0E99_14050 | Not Available | Negative | 2897583 - 2897966 | 14034.7 |
| deor/glpr transcriptional regulator | E0E99_14055 | Not Available | Positive | 2898087 - 2898857 | 27502.2 |
| transcriptional antiterminator | E0E99_14060 | Not Available | Negative | 2898854 - 2899138 | 10718.8 |
| thioredoxin family protein | E0E99_14065 | Not Available | Negative | 2899205 - 2899435 | 8098.76 |
| marr family transcriptional regulator | E0E99_14070 | Not Available | Positive | 2899550 - 2900113 | 21158.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

