Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | E0E99_13825 | Not Available | Negative | 2852847 - 2855027 | 79707.4 |
| methylenetetrahydrofolate reductase | E0E99_13830 | Not Available | Negative | 2855196 - 2856083 | 33024.4 |
| hypothetical protein | E0E99_13835 | Not Available | Positive | 2856069 - 2856254 | 6972.68 |
| lysr family transcriptional regulator | E0E99_13840 | Not Available | Negative | 2856241 - 2857149 | 33990.4 |
| carboxymuconolactone decarboxylase family protein | E0E99_13845 | Not Available | Positive | 2857239 - 2857616 | 13448.3 |
| bifunctional metallophosphatase/5'-nucleotidase | E0E99_13850 | Not Available | Negative | 2857655 - 2859211 | 56366.2 |
| cytoplasmic protein | E0E99_13855 | Not Available | Positive | 2859345 - 2860520 | 44865.5 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | E0E99_13860 | Not Available | Negative | 2860556 - 2862988 | 88770.7 |
| cystathionine gamma-synthase | E0E99_13865 | Not Available | Negative | 2862991 - 2864151 | 41450.5 |
| met regulon transcriptional regulator metj | E0E99_13870 | Not Available | Positive | 2864416 - 2864733 | 12208.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

