Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator oxyr | E0E99_13770 | Not Available | Negative | 2839110 - 2840027 | 34125.7 |
| argininosuccinate lyase | E0E99_13780 | Not Available | Negative | 2840290 - 2841663 | 50399.2 |
| acetylglutamate kinase | E0E99_13785 | Not Available | Negative | 2841772 - 2842545 | 26988.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase | E0E99_13790 | Not Available | Negative | 2842556 - 2843560 | 35811.0 |
| acetylornithine deacetylase | E0E99_13795 | Not Available | Positive | 2843716 - 2844867 | 42208.6 |
| phosphoenolpyruvate carboxylase | E0E99_13800 | Not Available | Positive | 2845137 - 2847788 | 99209.4 |
| phosphoethanolamine transferase cpta | E0E99_13805 | Not Available | Positive | 2848001 - 2849734 | 66236.7 |
| arac family transcriptional regulator | E0E99_13810 | Not Available | Positive | 2849886 - 2850734 | 32296.5 |
| fructose-6-phosphate aldolase | E0E99_13815 | Not Available | Positive | 2850982 - 2851644 | 23515.6 |
| glycerol dehydrogenase | E0E99_13820 | Not Available | Positive | 2851657 - 2852760 | 38726.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

