Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family lipoprotein | E0E99_13720 | Not Available | Negative | 2828319 - 2829134 | 29433.3 |
| d-methionine abc transporter permease meti | E0E99_13725 | Not Available | Negative | 2829179 - 2829832 | 23292.6 |
| d-methionine abc transporter, atp-binding protein | E0E99_13730 | Not Available | Negative | 2829825 - 2830856 | 37770.6 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | E0E99_13735 | Not Available | Positive | 2831046 - 2831612 | 21008.1 |
| glutamate racemase | E0E99_13740 | Not Available | Negative | 2832322 - 2833173 | 31087.6 |
| tonb-dependent vitamin b12 receptor btub | E0E99_13745 | Not Available | Negative | 2833118 - 2834974 | 68654.2 |
| trna (uridine(54)-c5)-methyltransferase trma | E0E99_13750 | Not Available | Positive | 2835342 - 2836442 | 42048.3 |
| yijd family membrane protein | E0E99_13755 | Not Available | Negative | 2836525 - 2836884 | 13038.3 |
| hth-type transcriptional repressor fabr | E0E99_13760 | Not Available | Negative | 2836900 - 2837535 | 24060.9 |
| si-specific nad(p)(+) transhydrogenase | E0E99_13765 | Not Available | Positive | 2837727 - 2839127 | 51545.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

