Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | E0E99_00220 | Not Available | Positive | 43852 - 45996 | 79101.3 |
| hemin abc transporter substrate-binding protein | E0E99_00225 | Not Available | Positive | 45999 - 46823 | 29371.7 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | E0E99_00230 | Not Available | Positive | 46842 - 48179 | 49649.5 |
| heme utilization cystosolic carrier protein hutx | E0E99_00235 | Not Available | Positive | 48192 - 48686 | 18213.7 |
| anaerobilin reductase | E0E99_00240 | Not Available | Positive | 48686 - 49309 | 21790.2 |
| iron abc transporter permease | E0E99_00245 | Not Available | Positive | 49349 - 50353 | 35578.0 |
| heme abc transporter atp-binding protein | E0E99_00250 | Not Available | Positive | 50350 - 51120 | 29411.7 |
| copper-exporting p-type atpase copa | E0E99_00255 | Not Available | Positive | 51269 - 53770 | 87933.3 |
| hypothetical protein | E0E99_00260 | Not Available | Positive | 53871 - 54665 | 29742.0 |
| cys-trna(pro)/cys-trna(cys) deacylase ybak | E0E99_00265 | Not Available | Positive | 54868 - 55347 | 17143.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

