Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | E0E99_13670 | Not Available | Positive | 2821081 - 2821470 | 14710.6 |
| trna lysidine(34) synthetase tils | E0E99_13675 | Not Available | Positive | 2821532 - 2822824 | 47994.6 |
| rho-binding antiterminator | E0E99_13680 | Not Available | Negative | 2822888 - 2823148 | 9589.35 |
| yaep family protein | E0E99_13685 | Not Available | Negative | 2823135 - 2823335 | 7252.61 |
| yaeq family protein | E0E99_13690 | Not Available | Positive | 2823524 - 2824069 | 20878.7 |
| aminoacyl-trna hydrolase | E0E99_13695 | Not Available | Positive | 2824066 - 2824488 | 15624.9 |
| envelope stress response activation lipoprotein nlpe | E0E99_13700 | Not Available | Positive | 2824519 - 2825217 | 25676.7 |
| proline--trna ligase | E0E99_13705 | Not Available | Negative | 2825262 - 2826980 | 63641.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | E0E99_13710 | Not Available | Negative | 2827094 - 2827801 | 26674.0 |
| rcs stress response system protein rcsf | E0E99_13715 | Not Available | Negative | 2827798 - 2828202 | 14113.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

