Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | E0E99_13620 | Not Available | Positive | 2807151 - 2809568 | 89575.6 |
| molecular chaperone skp | E0E99_13625 | Not Available | Positive | 2809691 - 2810176 | 17685.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | E0E99_13630 | Not Available | Positive | 2810180 - 2811205 | 35993.6 |
| 3-hydroxyacyl-acp dehydratase fabz | E0E99_13635 | Not Available | Positive | 2811309 - 2811764 | 17043.0 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | E0E99_13640 | Not Available | Positive | 2811768 - 2812556 | 28165.8 |
| lipid-a-disaccharide synthase | E0E99_13645 | Not Available | Positive | 2812556 - 2813704 | 42444.1 |
| ribonuclease hii | E0E99_13650 | Not Available | Positive | 2813701 - 2814297 | 21465.2 |
| dna polymerase iii subunit alpha | E0E99_13655 | Not Available | Positive | 2814322 - 2817804 | 130159.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | E0E99_13660 | Not Available | Positive | 2817817 - 2818776 | 35301.6 |
| lysine decarboxylase ldcc | E0E99_13665 | Not Available | Positive | 2818876 - 2821014 | 80441.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

