Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | E0E99_13570 | Not Available | Negative | 2795448 - 2798120 | 102488.0 |
| type i methionyl aminopeptidase | E0E99_13575 | Not Available | Negative | 2798234 - 2799028 | 29212.3 |
| 30s ribosomal protein s2 | E0E99_13580 | Not Available | Positive | 2799353 - 2800078 | 26818.2 |
| elongation factor ts | E0E99_13585 | Not Available | Positive | 2800215 - 2801066 | 30401.6 |
| ump kinase | E0E99_13590 | Not Available | Positive | 2801212 - 2801937 | 25984.9 |
| ribosome recycling factor | E0E99_13595 | Not Available | Positive | 2802077 - 2802634 | 20551.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | E0E99_13600 | Not Available | Positive | 2802745 - 2803941 | 43392.4 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | E0E99_13605 | Not Available | Positive | 2804129 - 2804887 | 28421.8 |
| phosphatidate cytidylyltransferase | E0E99_13610 | Not Available | Positive | 2804900 - 2805757 | 31457.6 |
| sigma e protease regulator rsep | E0E99_13615 | Not Available | Positive | 2805769 - 2807121 | 49156.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

