Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h(+)/cl(-) exchange transporter clca | E0E99_13520 | Not Available | Positive | 2785420 - 2786841 | 50203.8 |
| iron-sulfur cluster insertion protein erpa | E0E99_13525 | Not Available | Positive | 2786923 - 2787267 | 12070.1 |
| tric cation channel family protein | E0E99_13530 | Not Available | Negative | 2787387 - 2788010 | 22074.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | E0E99_13535 | Not Available | Negative | 2788048 - 2788848 | 29083.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | E0E99_13540 | Not Available | Negative | 2788841 - 2789539 | 24303.4 |
| dgtpase | E0E99_13545 | Not Available | Positive | 2789623 - 2791140 | 59397.0 |
| serine endoprotease degp | E0E99_13550 | Not Available | Positive | 2791270 - 2792703 | 49450.6 |
| cdar family transcriptional regulator | E0E99_13555 | Not Available | Positive | 2792851 - 2794008 | 43669.2 |
| duf3461 family protein | E0E99_13560 | Not Available | Negative | 2794096 - 2794482 | 15083.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | E0E99_13565 | Not Available | Negative | 2794592 - 2795416 | 29878.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

