Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_13470 | Not Available | Positive | 2772533 - 2772751 | 8016.65 |
| type 1 fimbrial protein | E0E99_13475 | Not Available | Positive | 2772865 - 2773407 | 18950.2 |
| molecular chaperone | E0E99_13480 | Not Available | Positive | 2773530 - 2774171 | 23991.8 |
| fimbrial biogenesis outer membrane usher protein | E0E99_13485 | Not Available | Positive | 2774204 - 2776687 | 90789.0 |
| type 1 fimbrial protein | E0E99_13490 | Not Available | Positive | 2776756 - 2777724 | 34540.2 |
| ferrichrome porin fhua | E0E99_13495 | Not Available | Positive | 2777935 - 2780184 | 82331.5 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | E0E99_13500 | Not Available | Positive | 2780231 - 2781028 | 29045.4 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | E0E99_13505 | Not Available | Positive | 2781028 - 2781918 | 33145.2 |
| fe(3+)-hydroxamate abc transporter permease fhub | E0E99_13510 | Not Available | Positive | 2781915 - 2783897 | 70218.3 |
| glutamate-1-semialdehyde-2,1-aminomutase | E0E99_13515 | Not Available | Negative | 2783971 - 2785251 | 45442.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

