Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_13370 | Not Available | Positive | 2746641 - 2746838 | 7381.96 |
| co-chaperone hscb | E0E99_13375 | Not Available | Positive | 2746778 - 2747293 | 20161.7 |
| fe-s protein assembly chaperone hsca | E0E99_13380 | Not Available | Positive | 2747309 - 2749159 | 65494.1 |
| isc system 2fe-2s type ferredoxin | E0E99_13385 | Not Available | Positive | 2749161 - 2749496 | 12403.6 |
| fe-s cluster assembly protein iscx | E0E99_13390 | Not Available | Positive | 2749508 - 2749708 | 7711.91 |
| aminopeptidase pepb | E0E99_13395 | Not Available | Positive | 2749770 - 2751053 | 46444.0 |
| enhanced serine sensitivity protein sseb | E0E99_13400 | Not Available | Positive | 2751163 - 2751939 | 28613.1 |
| 3-mercaptopyruvate sulfurtransferase | E0E99_13405 | Not Available | Negative | 2751983 - 2752828 | 30621.2 |
| alpha-2-macroglobulin family protein | E0E99_13410 | Not Available | Positive | 2753035 - 2757969 | 180454.0 |
| penicillin-binding protein 1c | E0E99_13415 | Not Available | Positive | 2757970 - 2760282 | 84641.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

