Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | E0E99_13320 | Not Available | Negative | 2737570 - 2739078 | 55587.5 |
| autoinducer 2 abc transporter substrate-binding protein | E0E99_13325 | Not Available | Negative | 2739182 - 2740165 | 35508.0 |
| duf1007 family protein | E0E99_13330 | Not Available | Positive | 2740586 - 2741224 | 24100.6 |
| nickel/cobalt transporter | E0E99_13335 | Not Available | Positive | 2741215 - 2742195 | 35421.7 |
| inositol-1-monophosphatase | E0E99_13340 | Not Available | Negative | 2742268 - 2743071 | 29148.8 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | E0E99_13345 | Not Available | Positive | 2743190 - 2743921 | 26709.1 |
| fe-s cluster assembly transcriptional regulator iscr | E0E99_13350 | Not Available | Positive | 2744095 - 2744586 | 17421.7 |
| iscs subfamily cysteine desulfurase | E0E99_13355 | Not Available | Positive | 2744699 - 2745913 | 45041.1 |
| fe-s cluster assembly scaffold iscu | E0E99_13360 | Not Available | Positive | 2745939 - 2746325 | 13807.3 |
| iron-sulfur cluster assembly protein isca | E0E99_13365 | Not Available | Positive | 2746346 - 2746669 | 11488.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

