Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | E0E99_13270 | Not Available | Negative | 2723620 - 2724813 | 44240.8 |
| duf5107 domain-containing protein | E0E99_13275 | Not Available | Positive | 2724928 - 2728194 | 122974.0 |
| mfs transporter | E0E99_13280 | Not Available | Positive | 2728268 - 2729707 | 51615.1 |
| aldose 1-epimerase | E0E99_13285 | Not Available | Positive | 2729707 - 2730549 | 31462.6 |
| 3-phenylpropionate mfs transporter | E0E99_13290 | Not Available | Positive | 2730638 - 2731786 | 41834.1 |
| stationary phase inducible protein csie | E0E99_13295 | Not Available | Negative | 2731781 - 2733058 | 48750.2 |
| sis domain-containing protein | E0E99_13300 | Not Available | Negative | 2733382 - 2733981 | 20851.2 |
| ribulokinase | E0E99_13305 | Not Available | Negative | 2733978 - 2735615 | 59815.5 |
| abc transporter permease | E0E99_13310 | Not Available | Negative | 2735633 - 2736586 | 32940.9 |
| abc transporter permease | E0E99_13315 | Not Available | Negative | 2736588 - 2737577 | 35108.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

