Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator glrr | E0E99_13220 | Not Available | Positive | 2713669 - 2715006 | 49302.5 |
| nitrogen regulatory protein p-ii | E0E99_13225 | Not Available | Positive | 2715067 - 2715405 | 12430.2 |
| no-inducible flavohemoprotein | E0E99_13230 | Not Available | Negative | 2715507 - 2716697 | 43656.9 |
| serine hydroxymethyltransferase | E0E99_13235 | Not Available | Positive | 2717024 - 2718277 | 45484.5 |
| phenylpropionate dioxygenase ferredoxin reductase subunit | E0E99_13240 | Not Available | Negative | 2718370 - 2719572 | 43372.2 |
| 3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase | E0E99_13245 | Not Available | Negative | 2719582 - 2720394 | 28473.2 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | E0E99_13250 | Not Available | Negative | 2720391 - 2720711 | 11320.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | E0E99_13255 | Not Available | Negative | 2720711 - 2721229 | 20489.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | E0E99_13260 | Not Available | Negative | 2721226 - 2722587 | 51028.7 |
| dna-binding transcriptional regulator hcar | E0E99_13265 | Not Available | Positive | 2722723 - 2723616 | 32815.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

