Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | E0E99_00175 | Not Available | Positive | 35593 - 36363 | 28034.2 |
| co-chaperone ybbn | E0E99_00180 | Not Available | Positive | 36365 - 37276 | 33799.2 |
| iron export abc transporter permease subunit fetb | E0E99_00185 | Not Available | Negative | 37355 - 38134 | 28304.6 |
| iron abc transporter atp-binding protein feta | E0E99_00190 | Not Available | Negative | 38121 - 38798 | 25485.5 |
| spfh/band 7/phb domain protein | E0E99_00195 | Not Available | Positive | 38933 - 39850 | 33718.1 |
| nfed family protein | E0E99_00200 | Not Available | Positive | 39847 - 40305 | 16714.6 |
| hypothetical protein | E0E99_00205 | Not Available | Positive | 40325 - 42469 | 80066.6 |
| duf3142 domain-containing protein | E0E99_00210 | Not Available | Positive | 42439 - 43155 | 26507.1 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 42571 - 42678 | Not Available |
| hth-type transcriptional regulator cuer | E0E99_00215 | Not Available | Negative | 43152 - 43562 | 15285.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

