Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | E0E99_13170 | Not Available | Positive | 2702225 - 2702845 | 23128.1 |
| 23s rrna pseudouridine(2605) synthase rlub | E0E99_13175 | Not Available | Positive | 2702946 - 2703821 | 32716.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | E0E99_13180 | Not Available | Negative | 2703905 - 2704495 | 21842.0 |
| ycik family oxidoreductase | E0E99_13185 | Not Available | Negative | 2704492 - 2705253 | 28001.6 |
| protease sohb | E0E99_13190 | Not Available | Positive | 2705475 - 2706521 | 39093.6 |
| duf2498 family protein | E0E99_13195 | Not Available | Negative | 2706632 - 2706883 | 9376.23 |
| type i dna topoisomerase | E0E99_13200 | Not Available | Positive | 2707282 - 2709879 | 97403.0 |
| hth-type transcriptional regulator cysb | E0E99_13205 | Not Available | Positive | 2710088 - 2711062 | 36103.2 |
| two component system sensor histidine kinase qsee/glrk | E0E99_13210 | Not Available | Positive | 2711476 - 2712906 | 53332.8 |
| two-component system qseef-associated lipoprotein qseg | E0E99_13215 | Not Available | Positive | 2712929 - 2713672 | 27825.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

