Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf440 family protein | E0E99_13065 | Not Available | Negative | 2682979 - 2683308 | 12715.7 |
| cardiolipin synthase | E0E99_13070 | Not Available | Negative | 2683343 - 2684803 | 54697.3 |
| yciy family protein | E0E99_13075 | Not Available | Positive | 2684946 - 2685119 | 7041.78 |
| ycii family protein | E0E99_13085 | Not Available | Negative | 2686278 - 2686574 | 10550.5 |
| tonb system transport protein tonb | E0E99_13090 | Not Available | Positive | 2686799 - 2687518 | 26051.6 |
| acyl-coa thioester hydrolase ycia | E0E99_13095 | Not Available | Negative | 2687583 - 2687984 | 14366.6 |
| septation protein a | E0E99_13100 | Not Available | Negative | 2688150 - 2688689 | 20769.1 |
| upf0259 family protein | E0E99_13105 | Not Available | Negative | 2688744 - 2689487 | 26523.8 |
| outer membrane protein ompw | E0E99_13110 | Not Available | Positive | 2689886 - 2690524 | 22983.2 |
| yebc/pmpr family dna-binding transcriptional regulator | E0E99_13115 | Not Available | Positive | 2691093 - 2691809 | 25719.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

