Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase subunit beta | E0E99_12945 | Not Available | Positive | 2661373 - 2662911 | 57797.1 |
| nitrate reductase molybdenum cofactor assembly chaperone | E0E99_12950 | Not Available | Positive | 2662908 - 2663618 | 26403.1 |
| respiratory nitrate reductase subunit gamma | E0E99_12955 | Not Available | Positive | 2663618 - 2664295 | 25518.9 |
| Trna-tyr | Not Available | Not Available | Positive | 2664708 - 2664792 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2665001 - 2665085 | Not Available |
| formyltetrahydrofolate deformylase | E0E99_12980 | Not Available | Negative | 2665242 - 2666084 | 31936.7 |
| hypothetical protein | E0E99_12985 | Not Available | Negative | 2666140 - 2666595 | 17024.1 |
| patatin-like phospholipase rssa | E0E99_12990 | Not Available | Positive | 2666707 - 2667618 | 33194.4 |
| two-component system response regulator rssb | E0E99_12995 | Not Available | Positive | 2667709 - 2668722 | 37271.3 |
| utp--glucose-1-phosphate uridylyltransferase galu | E0E99_13000 | Not Available | Positive | 2668927 - 2669835 | 32919.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

