Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | E0E99_12895 | Not Available | Positive | 2649279 - 2649511 | 8792.05 |
| gamma-glutamylcyclotransferase | E0E99_12900 | Not Available | Positive | 2649753 - 2650448 | 25296.6 |
| duf1883 domain-containing protein | E0E99_12905 | Not Available | Negative | 2650503 - 2650748 | 9080.83 |
| hypothetical protein | E0E99_12910 | Not Available | Negative | 2651011 - 2651364 | 12578.4 |
| ycho/ychp family invasin | E0E99_12915 | Not Available | Positive | 2651540 - 2652925 | 51517.2 |
| two-component system response regulator narl | E0E99_12920 | Not Available | Negative | 2652947 - 2653597 | 23849.2 |
| nitrate/nitrite two-component system sensor histidine kinase narx | E0E99_12925 | Not Available | Negative | 2653590 - 2655386 | 66990.6 |
| hypothetical protein | E0E99_12930 | Not Available | Positive | 2655454 - 2655639 | 6787.26 |
| nark family nitrate/nitrite mfs transporter | E0E99_12935 | Not Available | Positive | 2655727 - 2657118 | 49664.2 |
| nitrate reductase subunit alpha | E0E99_12940 | Not Available | Positive | 2657633 - 2661376 | 140645.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

