Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin 3 | E0E99_12845 | Not Available | Positive | 2639928 - 2640179 | 9162.09 |
| protein-export chaperone secb | E0E99_12850 | Not Available | Positive | 2640226 - 2640693 | 17246.2 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | E0E99_12855 | Not Available | Positive | 2640693 - 2641712 | 36210.7 |
| serine o-acetyltransferase | E0E99_12860 | Not Available | Positive | 2641791 - 2642612 | 29298.5 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | E0E99_12865 | Not Available | Negative | 2642699 - 2643172 | 17602.2 |
| mfs transporter | E0E99_12870 | Not Available | Negative | 2643219 - 2644559 | 48408.4 |
| alpha-hydroxy-acid oxidizing protein | E0E99_12875 | Not Available | Negative | 2644755 - 2645945 | 42781.6 |
| transcriptional regulator lldr | E0E99_12880 | Not Available | Negative | 2645942 - 2646718 | 28826.4 |
| l-lactate permease | E0E99_12885 | Not Available | Negative | 2646715 - 2648370 | 59445.8 |
| yibl family ribosome-associated protein | E0E99_12890 | Not Available | Negative | 2648634 - 2648996 | 13876.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

