Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantetheine-phosphate adenylyltransferase | E0E99_12745 | Not Available | Negative | 2618227 - 2618706 | 17945.8 |
| 3-deoxy-d-manno-octulosonic acid transferase | E0E99_12750 | Not Available | Negative | 2618715 - 2619992 | 47297.8 |
| glycosyltransferase family 1 protein | E0E99_12755 | Not Available | Positive | 2620417 - 2621541 | 42433.7 |
| lipopolysaccharide core heptose(i) kinase rfap | E0E99_12760 | Not Available | Positive | 2621534 - 2622331 | 31087.3 |
| lipopolysaccharide 1,2-glucosyltransferase | E0E99_12765 | Not Available | Positive | 2622362 - 2623381 | 39550.3 |
| lipopolysaccharide 1,2-glucosyltransferase | E0E99_12770 | Not Available | Positive | 2623432 - 2624439 | 38929.7 |
| glycosyltransferase family 8 protein | E0E99_12775 | Not Available | Negative | 2624470 - 2625414 | 37282.3 |
| lipopolysaccharide core heptosyltransferase rfaq | E0E99_12780 | Not Available | Negative | 2625415 - 2626470 | 40141.6 |
| glycosyltransferase family 2 protein | E0E99_12785 | Not Available | Negative | 2626472 - 2627485 | 39528.8 |
| o-antigen ligase family protein | E0E99_12790 | Not Available | Negative | 2627478 - 2628656 | 43019.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

