Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease ph | E0E99_12695 | Not Available | Positive | 2611925 - 2612641 | 25229.3 |
| orotate phosphoribosyltransferase | E0E99_12700 | Not Available | Positive | 2612707 - 2613348 | 23499.3 |
| nucleoid occlusion factor slma | E0E99_12705 | Not Available | Negative | 2613431 - 2614027 | 22865.8 |
| hypothetical protein | E0E99_12710 | Not Available | Positive | 2614026 - 2614214 | 7338.93 |
| dutp diphosphatase | E0E99_12715 | Not Available | Negative | 2614144 - 2614599 | 16095.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | E0E99_12720 | Not Available | Negative | 2614580 - 2615800 | 43322.4 |
| jab domain-containing protein | E0E99_12725 | Not Available | Positive | 2615972 - 2616637 | 24999.5 |
| 50s ribosomal protein l28 | E0E99_12730 | Not Available | Positive | 2616856 - 2617092 | 9037.05 |
| 50s ribosomal protein l33 | E0E99_12735 | Not Available | Positive | 2617113 - 2617280 | 6371.94 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | E0E99_12740 | Not Available | Positive | 2617379 - 2618188 | 30220.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

