Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | E0E99_00130 | Not Available | Positive | 25463 - 26530 | 39289.3 |
| trna 2-selenouridine(34) synthase mnmh | E0E99_00135 | Not Available | Positive | 26627 - 27712 | 40803.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 27615 - 27730 | Not Available |
| abc transporter permease | E0E99_00140 | Not Available | Negative | 27713 - 28372 | 23729.8 |
| virulence-associated abc transporter atp-binding protein sfbb | E0E99_00145 | Not Available | Negative | 28365 - 29381 | 36428.5 |
| metal abc transporter substrate-binding protein | E0E99_00150 | Not Available | Negative | 29445 - 30275 | 29925.1 |
| porin | E0E99_00155 | Not Available | Negative | 30551 - 31684 | 42551.3 |
| abc transporter permease | E0E99_00160 | Not Available | Negative | 31873 - 34287 | 89331.6 |
| abc transporter atp-binding protein | E0E99_00165 | Not Available | Negative | 34284 - 34970 | 24590.5 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | E0E99_00170 | Not Available | Positive | 34938 - 35564 | 23605.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

