Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine permease xanp | E0E99_12645 | Not Available | Negative | 2599389 - 2600780 | 48720.0 |
| sodium/glutamate symporter | E0E99_12650 | Not Available | Positive | 2601006 - 2602211 | 42551.1 |
| atp-dependent dna helicase recg | E0E99_12655 | Not Available | Negative | 2602254 - 2604335 | 76268.8 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | E0E99_12660 | Not Available | Negative | 2604341 - 2605030 | 25708.9 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | E0E99_12665 | Not Available | Negative | 2605035 - 2607149 | 79508.3 |
| dna-directed rna polymerase subunit omega | E0E99_12670 | Not Available | Negative | 2607168 - 2607443 | 10237.2 |
| guanylate kinase | E0E99_12675 | Not Available | Negative | 2607498 - 2608121 | 23465.9 |
| nad-dependent dna ligase ligb | E0E99_12680 | Not Available | Positive | 2608383 - 2610062 | 62976.3 |
| trimeric intracellular cation channel family protein | E0E99_12685 | Not Available | Negative | 2610059 - 2610676 | 22086.0 |
| yicc family protein | E0E99_12690 | Not Available | Negative | 2610936 - 2611799 | 33122.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

