Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside-pentoside-hexuronide family transporter | E0E99_12595 | Not Available | Positive | 2587442 - 2588824 | 50724.1 |
| alpha-xylosidase | E0E99_12600 | Not Available | Positive | 2588835 - 2591153 | 88201.3 |
| prd domain-containing protein | E0E99_12605 | Not Available | Positive | 2591476 - 2593029 | 58462.5 |
| pts sugar transporter subunit iia | E0E99_12610 | Not Available | Positive | 2593056 - 2593526 | 17441.7 |
| pts fructose transporter subunit iib | E0E99_12615 | Not Available | Positive | 2593546 - 2593866 | 11629.2 |
| pts fructose transporter subunit iic | E0E99_12620 | Not Available | Positive | 2593893 - 2594984 | 38790.1 |
| aldolase | E0E99_12625 | Not Available | Positive | 2594996 - 2595847 | 30078.4 |
| ketose-bisphosphate aldolase | E0E99_12630 | Not Available | Positive | 2595928 - 2596788 | 30867.0 |
| d-lyxose/d-mannose family sugar isomerase | E0E99_12635 | Not Available | Positive | 2596838 - 2597515 | 26021.8 |
| asma family protein | E0E99_12640 | Not Available | Negative | 2597558 - 2599267 | 61890.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

