Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein ii | E0E99_12540 | Not Available | Negative | 2576193 - 2577848 | 59445.1 |
| dicarboxylate/amino acid:cation symporter | E0E99_12545 | Not Available | Positive | 2578255 - 2579514 | 44327.6 |
| chemotaxis protein chew | E0E99_12550 | Not Available | Negative | 2579591 - 2580094 | 18078.9 |
| chemotaxis protein chea | E0E99_12555 | Not Available | Negative | 2580115 - 2582151 | 73707.2 |
| motility protein motb | E0E99_12560 | Not Available | Negative | 2582156 - 2583085 | 34325.1 |
| flagellar motor stator protein mota | E0E99_12565 | Not Available | Negative | 2583082 - 2583969 | 32002.4 |
| flagellar transcriptional regulator flhc | E0E99_12570 | Not Available | Negative | 2584094 - 2584678 | 21803.7 |
| flagellar transcriptional regulator flhd | E0E99_12575 | Not Available | Negative | 2584675 - 2585025 | 13326.2 |
| hydroxyacid dehydrogenase | E0E99_12585 | Not Available | Negative | 2585899 - 2586936 | 40311.7 |
| Trna-sec(p) | Not Available | Not Available | Positive | 2587060 - 2587150 | Not Available |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

