Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | E0E99_12490 | Not Available | Positive | 2564418 - 2566355 | 72284.4 |
| glycoside hydrolase family 105 protein | E0E99_12495 | Not Available | Negative | 2566327 - 2567466 | 43922.4 |
| flagellar protein flhe | E0E99_12500 | Not Available | Negative | 2567775 - 2568167 | 14098.1 |
| flagellar biosynthesis protein flha | E0E99_12505 | Not Available | Negative | 2568167 - 2570245 | 74920.7 |
| flagellar type iii secretion system protein flhb | E0E99_12510 | Not Available | Negative | 2570238 - 2571389 | 42282.5 |
| protein phosphatase chez | E0E99_12515 | Not Available | Negative | 2571548 - 2572192 | 23869.3 |
| chemotaxis protein chey | E0E99_12520 | Not Available | Negative | 2572203 - 2572592 | 14068.2 |
| chemotaxis response regulator protein-glutamate methylesterase | E0E99_12525 | Not Available | Negative | 2572610 - 2573659 | 37605.3 |
| protein-glutamate o-methyltransferase cher | E0E99_12530 | Not Available | Negative | 2573656 - 2574528 | 33081.6 |
| methyl-accepting chemotaxis protein iv | E0E99_12535 | Not Available | Negative | 2574548 - 2576149 | 57018.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

