Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptidase b | E0E99_12340 | Not Available | Negative | 2534395 - 2536473 | 79529.3 |
| tellurite resistance terb family protein | E0E99_12345 | Not Available | Negative | 2536536 - 2537195 | 23768.4 |
| hypothetical protein | E0E99_12350 | Not Available | Negative | 2537290 - 2537643 | 12925.4 |
| dna damage-inducible protein yebg | E0E99_12355 | Not Available | Negative | 2537765 - 2538055 | 10651.4 |
| formate-dependent phosphoribosylglycinamide formyltransferase | E0E99_12360 | Not Available | Positive | 2538187 - 2539365 | 42498.2 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | E0E99_12365 | Not Available | Negative | 2539432 - 2540073 | 22232.2 |
| phosphogluconate dehydratase | E0E99_12370 | Not Available | Negative | 2540108 - 2541919 | 64633.9 |
| glucose-6-phosphate dehydrogenase | E0E99_12375 | Not Available | Negative | 2542153 - 2543628 | 55837.6 |
| hypothetical protein | E0E99_12380 | Not Available | Positive | 2543601 - 2543780 | 6501.15 |
| murr/rpir family transcriptional regulator | E0E99_12385 | Not Available | Positive | 2543996 - 2544865 | 32061.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

