Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein subunit fimi | E0E99_00085 | Not Available | Negative | 18381 - 18914 | 18979.8 |
| type 1 fimbrial protein subunit fima | E0E99_00090 | Not Available | Negative | 18992 - 19546 | 18506.7 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | E0E99_00095 | Not Available | Positive | 20118 - 20984 | 30940.6 |
| ribosome-associated protein ybcj | E0E99_00100 | Not Available | Positive | 20986 - 21198 | 7420.03 |
| metal-dependent hydrolase | E0E99_00105 | Not Available | Positive | 21324 - 21848 | 19527.6 |
| Ncrna_class:other | Not Available | Not Available | Positive | 22072 - 22205 | Not Available |
| cysteine--trna ligase | E0E99_00110 | Not Available | Negative | 21940 - 23325 | 52114.7 |
| peptidylprolyl isomerase b | E0E99_00115 | Not Available | Positive | 23499 - 23993 | 18175.5 |
| udp-2,3-diacylglucosamine diphosphatase | E0E99_00120 | Not Available | Positive | 23996 - 24718 | 26779.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | E0E99_00125 | Not Available | Positive | 24957 - 25466 | 17711.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

