Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein biosynthesis integral membrane protein murj | E0E99_12045 | Not Available | Positive | 2481699 - 2483234 | 55464.9 |
| flagella biosynthesis chaperone flgn | E0E99_12050 | Not Available | Negative | 2483320 - 2483742 | 15954.8 |
| anti-sigma-28 factor flgm | E0E99_12055 | Not Available | Negative | 2483746 - 2484039 | 10609.7 |
| flagellar basal body p-ring formation protein flga | E0E99_12060 | Not Available | Negative | 2484133 - 2484792 | 23446.5 |
| flagellar basal body rod protein flgb | E0E99_12065 | Not Available | Positive | 2484950 - 2485366 | 15110.0 |
| flagellar basal body rod protein flgc | E0E99_12070 | Not Available | Positive | 2485370 - 2485774 | 13941.7 |
| flagellar hook assembly protein flgd | E0E99_12075 | Not Available | Positive | 2485786 - 2486484 | 23853.0 |
| flagellar hook protein flge | E0E99_12080 | Not Available | Positive | 2486511 - 2487722 | 42195.1 |
| flagellar basal body rod protein flgf | E0E99_12085 | Not Available | Positive | 2487743 - 2488498 | 25940.8 |
| flagellar basal-body rod protein flgg | E0E99_12090 | Not Available | Positive | 2488512 - 2489294 | 27789.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

