Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2770 domain-containing protein | E0E99_11995 | Not Available | Negative | 2473685 - 2473798 | 4703.12 |
| n-methyl-l-tryptophan oxidase | E0E99_12000 | Not Available | Negative | 2473854 - 2474969 | 40515.8 |
| biofilm formation regulator bsss | E0E99_12005 | Not Available | Negative | 2475084 - 2475338 | 9631.23 |
| dna damage-inducible protein i | E0E99_12010 | Not Available | Negative | 2475679 - 2475924 | 9008.48 |
| dihydroorotase | E0E99_12015 | Not Available | Negative | 2475990 - 2477036 | 38900.8 |
| lipoprotein | E0E99_12020 | Not Available | Negative | 2477142 - 2477702 | 20489.9 |
| multidrug efflux mfs transporter mdth | E0E99_12025 | Not Available | Negative | 2477817 - 2479025 | 44198.9 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | E0E99_12030 | Not Available | Positive | 2479285 - 2479869 | 22780.1 |
| duf480 domain-containing protein | E0E99_12035 | Not Available | Positive | 2479904 - 2480551 | 23957.5 |
| gfo/idh/moca family oxidoreductase | E0E99_12040 | Not Available | Positive | 2480553 - 2481476 | 34093.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

