Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucans biosynthesis protein mdog | E0E99_11945 | Not Available | Positive | 2461839 - 2463374 | 58066.7 |
| glucans biosynthesis glucosyltransferase mdoh | E0E99_11950 | Not Available | Positive | 2463367 - 2465895 | 96561.2 |
| ycek/yidq family lipoprotein | E0E99_11955 | Not Available | Positive | 2465972 - 2466199 | 8479.34 |
| secy/seca suppressor protein | E0E99_11960 | Not Available | Negative | 2466200 - 2466577 | 14389.9 |
| ggdef domain-containing protein | E0E99_11965 | Not Available | Positive | 2467180 - 2468601 | 54319.4 |
| multidrug efflux mfs transporter mdtg | E0E99_11970 | Not Available | Negative | 2468665 - 2469885 | 43568.7 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | E0E99_11975 | Not Available | Negative | 2470041 - 2470961 | 35271.7 |
| rhodanese-related sulfurtransferase | E0E99_11980 | Not Available | Positive | 2471182 - 2472234 | 39909.4 |
| ycei family protein | E0E99_11985 | Not Available | Negative | 2472280 - 2472855 | 20784.4 |
| cytochrome b | E0E99_11990 | Not Available | Negative | 2472857 - 2473423 | 20709.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

