Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | E0E99_11885 | Not Available | Negative | 2451555 - 2454371 | 104142.0 |
| bifunctional riboflavin kinase/fad synthetase | E0E99_11890 | Not Available | Negative | 2454409 - 2455347 | 34541.1 |
| 30s ribosomal protein s20 | E0E99_11900 | Not Available | Positive | 2455676 - 2455939 | 9685.97 |
| curlin minor subunit csgb | E0E99_11905 | Not Available | Positive | 2456506 - 2456964 | 16178.1 |
| major curlin subunit csga | E0E99_11910 | Not Available | Positive | 2457005 - 2457454 | 15260.5 |
| curli assembly protein csgc | E0E99_11915 | Not Available | Positive | 2457516 - 2457848 | 11941.3 |
| type 1 fimbrial protein | E0E99_11920 | Not Available | Positive | 2458001 - 2458321 | 11913.5 |
| o-acetyl-adp-ribose deacetylase | E0E99_11925 | Not Available | Positive | 2458422 - 2458964 | 19313.1 |
| phospholipase d family protein | E0E99_11930 | Not Available | Positive | 2458900 - 2460387 | 56449.1 |
| glucans biosynthesis protein mdoc | E0E99_11935 | Not Available | Negative | 2460407 - 2461567 | 44342.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

