Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa hydratase | E0E99_11835 | Not Available | Positive | 2440580 - 2441365 | 28168.8 |
| carnitine operon protein caie | E0E99_11840 | Not Available | Positive | 2441372 - 2441968 | 21482.0 |
| carnitine metabolism transcriptional regulator caif | E0E99_11845 | Not Available | Negative | 2442044 - 2442439 | 15347.9 |
| carbamoyl-phosphate synthase large subunit | E0E99_11850 | Not Available | Negative | 2442713 - 2445940 | 118079.0 |
| carbamoyl-phosphate synthase small subunit | E0E99_11855 | Not Available | Negative | 2445958 - 2447106 | 41267.0 |
| 4-hydroxy-tetrahydrodipicolinate reductase | E0E99_11860 | Not Available | Negative | 2447563 - 2448384 | 28880.6 |
| ribonucleoside hydrolase rihc | E0E99_11865 | Not Available | Negative | 2448558 - 2449472 | 32720.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | E0E99_11870 | Not Available | Negative | 2449539 - 2450489 | 34446.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | E0E99_11875 | Not Available | Negative | 2450491 - 2450940 | 16065.9 |
| lipoprotein signal peptidase | E0E99_11880 | Not Available | Negative | 2451058 - 2451555 | 18291.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

