Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps assembly protein lptd | E0E99_11735 | Not Available | Positive | 2419247 - 2421601 | 89601.7 |
| peptidylprolyl isomerase sura | E0E99_11740 | Not Available | Positive | 2421655 - 2422941 | 46984.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | E0E99_11745 | Not Available | Positive | 2422941 - 2423933 | 34988.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | E0E99_11750 | Not Available | Positive | 2423926 - 2424747 | 30436.0 |
| co2+/mg2+ efflux protein apag | E0E99_11755 | Not Available | Positive | 2424750 - 2425127 | 13975.7 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | E0E99_11760 | Not Available | Positive | 2425138 - 2425986 | 31490.4 |
| type 3 dihydrofolate reductase | E0E99_11765 | Not Available | Negative | 2426083 - 2426562 | 18029.3 |
| glutathione-regulated potassium-efflux system protein kefc | E0E99_11770 | Not Available | Negative | 2426761 - 2428623 | 67418.5 |
| glutathione-regulated potassium-efflux system oxidoreductase keff | E0E99_11775 | Not Available | Negative | 2428616 - 2429146 | 20183.2 |
| ygdi/ygdr family lipoprotein | E0E99_11780 | Not Available | Negative | 2429250 - 2429483 | 8332.79 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

