Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | E0E99_11635 | Not Available | Positive | 2393347 - 2394747 | 49877.6 |
| 3-isopropylmalate dehydratase small subunit | E0E99_11640 | Not Available | Positive | 2394758 - 2395363 | 22558.7 |
| laci family dna-binding transcriptional regulator | E0E99_11645 | Not Available | Negative | 2395409 - 2396401 | 36646.2 |
| mfs transporter | E0E99_11650 | Not Available | Negative | 2396484 - 2397767 | 47635.3 |
| gluconate 5-dehydrogenase | E0E99_11655 | Not Available | Negative | 2397826 - 2398590 | 27410.0 |
| mfs transporter | E0E99_11660 | Not Available | Negative | 2398869 - 2400047 | 42652.8 |
| glucose uptake inhibitor sgrt | E0E99_11665 | Not Available | Negative | 2400421 - 2400549 | 5133.23 |
| hth-type transcriptional regulator sgrr | E0E99_11670 | Not Available | Positive | 2400649 - 2402304 | 64015.8 |
| thiamine abc transporter substrate binding subunit | E0E99_11675 | Not Available | Positive | 2402492 - 2403475 | 36444.6 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | E0E99_11680 | Not Available | Positive | 2403451 - 2405061 | 59602.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

