Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 10176 - 10252 | Not Available |
| fimbriae biosynthesis transcriptional regulator fimw | E0E99_00050 | Not Available | Positive | 10506 - 11099 | 23266.4 |
| fimbriae y protein | E0E99_00055 | Not Available | Positive | 11485 - 12207 | 28349.6 |
| fimbriae biosynthesis transcriptional regulator fimz | E0E99_00060 | Not Available | Positive | 12795 - 13427 | 23625.9 |
| fimbriae assembly protein | E0E99_00065 | Not Available | Negative | 13477 - 14013 | 18579.0 |
| type 1 fimbrin d-mannose specific adhesin fimh | E0E99_00070 | Not Available | Negative | 14006 - 15013 | 36216.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 15021 - 15152 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 15314 - 15445 | Not Available |
| fimbrial biogenesis outer membrane usher protein | E0E99_00075 | Not Available | Negative | 15018 - 17639 | 95508.5 |
| molecular chaperone fimc | E0E99_00080 | Not Available | Negative | 17647 - 18339 | 25082.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

