Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter permease artm | E0E99_11535 | Not Available | Positive | 2374292 - 2374960 | 24768.1 |
| arginine abc transporter substrate-binding protein | E0E99_11540 | Not Available | Positive | 2375188 - 2375919 | 26532.7 |
| lipid kinase yegs | E0E99_11545 | Not Available | Positive | 2376051 - 2376950 | 31972.4 |
| class i fructose-bisphosphate aldolase | E0E99_11550 | Not Available | Negative | 2376973 - 2378025 | 38065.4 |
| hypothetical protein | E0E99_11555 | Not Available | Positive | 2378061 - 2378294 | 8537.22 |
| mfs transporter | E0E99_11560 | Not Available | Positive | 2378278 - 2379555 | 47485.1 |
| adp-ribosylglycohydrolase family protein | E0E99_11565 | Not Available | Positive | 2379552 - 2380556 | 35381.4 |
| sugar kinase | E0E99_11570 | Not Available | Positive | 2380553 - 2381518 | 34439.2 |
| gntr family transcriptional regulator | E0E99_11575 | Not Available | Negative | 2381492 - 2382238 | 28220.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | E0E99_11580 | Not Available | Negative | 2382281 - 2383081 | 28603.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

