Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone-dependent pyruvate dehydrogenase | E0E99_11485 | Not Available | Positive | 2364542 - 2366260 | 62097.2 |
| low-specificity l-threonine aldolase | E0E99_11490 | Not Available | Positive | 2366416 - 2367417 | 36410.7 |
| sdr family oxidoreductase | E0E99_11495 | Not Available | Positive | 2367428 - 2368858 | 53741.4 |
| nad(p)-dependent oxidoreductase | E0E99_11500 | Not Available | Positive | 2368956 - 2369969 | 37912.6 |
| n-acetylmuramoyl-l-alanine amidase | E0E99_11505 | Not Available | Negative | 2370075 - 2370905 | 30991.3 |
| heavy metal-binding domain-containing protein | E0E99_11510 | Not Available | Negative | 2370902 - 2371225 | 11437.7 |
| lipoprotein | E0E99_11515 | Not Available | Positive | 2371352 - 2371867 | 18958.2 |
| arginine abc transporter atp-binding protein artp | E0E99_11520 | Not Available | Positive | 2372093 - 2372821 | 26978.7 |
| arginine abc transporter substrate-binding protein | E0E99_11525 | Not Available | Positive | 2372838 - 2373569 | 26968.0 |
| arginine abc transporter permease artq | E0E99_11530 | Not Available | Positive | 2373576 - 2374292 | 26241.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

