Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mdtb/muxb family multidrug efflux rnd transporter permease subunit | E0E99_11385 | Not Available | Positive | 2336102 - 2339224 | 112016.0 |
| multidrug transporter subunit mdtc | E0E99_11390 | Not Available | Positive | 2339225 - 2342305 | 111054.0 |
| mfs transporter | E0E99_11395 | Not Available | Positive | 2342302 - 2343714 | 50969.3 |
| two-component system sensor histidine kinase baes | E0E99_11400 | Not Available | Positive | 2343714 - 2345117 | 52218.6 |
| two-component system response regulator baer | E0E99_11405 | Not Available | Positive | 2345114 - 2345836 | 27635.6 |
| duf1508 domain-containing protein | E0E99_11410 | Not Available | Positive | 2345972 - 2346304 | 11998.0 |
| u32 family peptidase | E0E99_11415 | Not Available | Positive | 2346464 - 2347825 | 51323.3 |
| atp-dependent clp protease atp-binding subunit clpa | E0E99_11420 | Not Available | Negative | 2348096 - 2350372 | 84185.7 |
| atp-dependent clp protease adapter clps | E0E99_11425 | Not Available | Negative | 2350403 - 2350723 | 12164.7 |
| cold shock-like protein cspd | E0E99_11430 | Not Available | Positive | 2351047 - 2351271 | 7956.37 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

