Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | E0E99_11335 | Not Available | Positive | 2322593 - 2323354 | 27099.6 |
| terc family protein | E0E99_11340 | Not Available | Positive | 2323625 - 2325208 | 59129.4 |
| outer membrane assembly protein asma | E0E99_11345 | Not Available | Negative | 2325253 - 2327106 | 68653.0 |
| dctp deaminase | E0E99_11350 | Not Available | Negative | 2327133 - 2327714 | 21255.4 |
| uridine kinase | E0E99_11355 | Not Available | Negative | 2327806 - 2328447 | 24480.6 |
| diguanylate cyclase | E0E99_11360 | Not Available | Positive | 2328763 - 2332092 | 124527.0 |
| dna-3-methyladenine glycosylase 2 | E0E99_11365 | Not Available | Negative | 2332060 - 2332929 | 31805.4 |
| molecular chaperone | E0E99_11370 | Not Available | Positive | 2333066 - 2334418 | 49237.8 |
| type i toxin-antitoxin system ibs family toxin | E0E99_11375 | Not Available | Negative | 2334517 - 2334576 | 2165.96 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | E0E99_11380 | Not Available | Positive | 2334855 - 2336102 | 44314.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

