Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine permease | E0E99_11285 | Not Available | Positive | 2311821 - 2313371 | 55130.0 |
| carbamate kinase family protein | E0E99_11290 | Not Available | Positive | 2313398 - 2314348 | 33969.8 |
| deaminase | E0E99_11295 | Not Available | Positive | 2314361 - 2315743 | 50407.6 |
| nickel/cobalt efflux protein rcna | E0E99_11300 | Not Available | Negative | 2315788 - 2316687 | 32920.7 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | E0E99_11305 | Not Available | Positive | 2316808 - 2317080 | 10123.4 |
| transporter | E0E99_11310 | Not Available | Negative | 2317133 - 2318362 | 44906.6 |
| multidrug/biocide efflux pace transporter | E0E99_11315 | Not Available | Negative | 2318505 - 2318960 | 17469.7 |
| lysr family transcriptional regulator | E0E99_11320 | Not Available | Positive | 2319062 - 2319946 | 32789.3 |
| acetyl-coa c-acetyltransferase | E0E99_11325 | Not Available | Positive | 2320049 - 2321227 | 41327.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | E0E99_11330 | Not Available | Positive | 2321699 - 2322535 | 31130.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

