Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | E0E99_11235 | Not Available | Positive | 2301425 - 2303446 | 76681.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | E0E99_11240 | Not Available | Positive | 2303443 - 2304777 | 50870.8 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | E0E99_11245 | Not Available | Positive | 2304774 - 2305280 | 19493.8 |
| hypothetical protein | E0E99_11250 | Not Available | Positive | 2305363 - 2305593 | 8622.4 |
| n-acetyltransferase | E0E99_11255 | Not Available | Positive | 2305605 - 2305877 | 10161.2 |
| lysr family transcriptional regulator | E0E99_11260 | Not Available | Negative | 2305920 - 2306849 | 34837.1 |
| ankyrin repeat domain-containing protein | E0E99_11265 | Not Available | Positive | 2307240 - 2307845 | 21869.3 |
| duf2877 domain-containing protein | E0E99_11270 | Not Available | Positive | 2307972 - 2308760 | 29250.6 |
| acyl-coa synthetase fdra | E0E99_11275 | Not Available | Positive | 2308738 - 2310285 | 55407.0 |
| duf1116 domain-containing protein | E0E99_11280 | Not Available | Positive | 2310285 - 2311703 | 50917.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

