Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_11185 | Not Available | Positive | 2293714 - 2294163 | 16222.5 |
| duf905 domain-containing protein | E0E99_11190 | Not Available | Positive | 2294235 - 2294465 | 8992.6 |
| duf945 domain-containing protein | E0E99_11195 | Not Available | Positive | 2294564 - 2295385 | 31050.2 |
| antirestriction protein | E0E99_11200 | Not Available | Positive | 2295416 - 2295859 | 16613.6 |
| dna repair protein radc | E0E99_11205 | Not Available | Positive | 2295872 - 2296414 | 20064.2 |
| duf987 domain-containing protein | E0E99_11210 | Not Available | Positive | 2296411 - 2296632 | 8541.4 |
| type iv toxin-antitoxin system yeeu family antitoxin | E0E99_11215 | Not Available | Positive | 2296658 - 2297014 | 13120.7 |
| toxin | E0E99_11220 | Not Available | Positive | 2297035 - 2297358 | 12467.3 |
| n-acetyltransferase family protein | E0E99_11225 | Not Available | Negative | 2297600 - 2298136 | 20040.1 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | E0E99_11230 | Not Available | Positive | 2298953 - 2301415 | 92087.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

