Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kdo(2)-lipid iv(a) palmitoleoyltransferase | E0E99_11085 | Not Available | Positive | 2275986 - 2276894 | 34469.6 |
| alpha/beta fold hydrolase | E0E99_11090 | Not Available | Negative | 2277149 - 2278213 | 39125.8 |
| flavodoxin | E0E99_11095 | Not Available | Negative | 2278321 - 2278905 | 21353.3 |
| carboxymuconolactone decarboxylase family protein | E0E99_11100 | Not Available | Negative | 2278915 - 2279676 | 27041.3 |
| cupin domain-containing protein | E0E99_11105 | Not Available | Negative | 2279654 - 2280133 | 17030.2 |
| heavy metal sensor histidine kinase | E0E99_11110 | Not Available | Negative | 2280198 - 2281655 | 53165.3 |
| response regulator | E0E99_11115 | Not Available | Negative | 2281671 - 2282351 | 25297.8 |
| aldo/keto reductase | E0E99_11120 | Not Available | Negative | 2282366 - 2283508 | 42076.6 |
| alpha/beta hydrolase | E0E99_11125 | Not Available | Positive | 2283782 - 2284831 | 38229.5 |
| nitroreductase | E0E99_11130 | Not Available | Positive | 2285091 - 2285771 | 25166.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

