Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 249 - 364 | Not Available |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 855 - 1231 | Not Available |
| hypothetical protein | E0E99_00010 | Not Available | Negative | 767 - 988 | 8475.31 |
| molecular chaperone tord | E0E99_00015 | Not Available | Negative | 1143 - 1757 | 22904.5 |
| trimethylamine-n-oxide reductase tora | E0E99_00020 | Not Available | Negative | 1754 - 4294 | 94724.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4352 - 4467 | Not Available |
| pentaheme c-type cytochrome torc | E0E99_00025 | Not Available | Negative | 4284 - 5462 | 43962.2 |
| two-component system response regulator torr | E0E99_00030 | Not Available | Positive | 5594 - 6286 | 26290.8 |
| tmao reductase system periplasmic protein tort | E0E99_00035 | Not Available | Negative | 6259 - 7290 | 37633.5 |
| tmao reductase system sensor histidine kinase/response regulator tors | E0E99_00040 | Not Available | Positive | 7373 - 10138 | 102561.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

